<?xml version="1.0" encoding="UTF-8"?>
<rss version="2.0"
	xmlns:content="http://purl.org/rss/1.0/modules/content/"
	xmlns:wfw="http://wellformedweb.org/CommentAPI/"
	xmlns:dc="http://purl.org/dc/elements/1.1/"
	xmlns:atom="http://www.w3.org/2005/Atom"
	xmlns:sy="http://purl.org/rss/1.0/modules/syndication/"
	xmlns:slash="http://purl.org/rss/1.0/modules/slash/"
	>

<channel>
	<title>drug-test-information.com &#187; Different Organic Compounds</title>
	<atom:link href="http://drug-test-information.com/tag/different-organic-compounds/feed/" rel="self" type="application/rss+xml" />
	<link>http://drug-test-information.com</link>
	<description>drug test information</description>
	<lastBuildDate>Sat, 30 Jan 2010 07:00:59 +0000</lastBuildDate>
	<generator>http://wordpress.org/?v=2.8.4</generator>
	<language>en</language>
	<sy:updatePeriod>hourly</sy:updatePeriod>
	<sy:updateFrequency>1</sy:updateFrequency>
	<image>
<link>http://drug-test-information.com</link>
<url>http://drug-test-information.com/wp-content/plugins/maxblogpress-favicon/icons/Head-physician.ico</url>
<title>drug-test-information.com</title>
</image>
<xhtml:meta xmlns:xhtml="http://www.w3.org/1999/xhtml" name="robots" content="noindex" />
		<item>
		<title>Characterization and Antimicrobial Susceptibility of Vibrio Spp. Isolated From Different Environments</title>
		<link>http://drug-test-information.com/characterization-and-antimicrobial-susceptibility-of-vibrio-spp-isolated-from-different-environments/</link>
		<comments>http://drug-test-information.com/characterization-and-antimicrobial-susceptibility-of-vibrio-spp-isolated-from-different-environments/#comments</comments>
		<pubDate>Fri, 22 Jan 2010 03:05:12 +0000</pubDate>
		<dc:creator>drugtest</dc:creator>
				<category><![CDATA[swab drug test]]></category>
		<category><![CDATA[Different Organic Compounds]]></category>
		<category><![CDATA[Enterics]]></category>
		<category><![CDATA[Sea Water]]></category>
		<category><![CDATA[Sole Source]]></category>

		<guid isPermaLink="false">http://drug-test-information.com/characterization-and-antimicrobial-susceptibility-of-vibrio-spp-isolated-from-different-environments/</guid>
		<description><![CDATA[<a href=http://drug-test-information.com/characterization-and-antimicrobial-susceptibility-of-vibrio-spp-isolated-from-different-environments/><img src=/wp-content/uploads/2009/12/swab_drug25.jpg class=imgtfe hspace=5 align=left width=100  border=0></a>INTRODUCTIONThe genus Vibrio consists of Gram-negative straight or curved rods, motile by means of a single polar flagellum. Vibrios are capable of both respiratory and fermentative metabolism. O2 is a universal electron acceptor; they do not denitrify. Most species are oxidase-positive. In most ways vibrios are related to enteric bacteria, but they share some properties [...]]]></description>
			<content:encoded><![CDATA[<p><a href="/wp-content/uploads/2009/12/swab_drug25.jpg"><img src="/wp-content/uploads/2009/12/swab_drug25.jpg" title='' alt='' /></a><br />INTRODUCTION<br/><br/>The genus Vibrio consists of Gram-negative straight or curved rods, motile by means of a single polar flagellum. Vibrios are capable of both respiratory and fermentative metabolism. O2 is a universal electron acceptor; they do not denitrify. Most species are oxidase-positive. In most ways vibrios are related to enteric bacteria, but they share some properties with pseudomonads a well. The Family Vibrionaceae is found in the &#8220;Facultatively Anaerobic Gram-negative Rods&#8221; in Bergey&#8217;s Manual (1986), on the level with the Family Enterobacteriaceae. In the revisionist taxonomy of 2001 (Bergey&#8217;s Manual), based on phylogenetic analysis, Vibrionaceae, Pseudomonadaceae and Enterobacteriaceae are all landed in the Gammaproteobacteria. Vibrios are distinguished from enterics by being oxidase-positive and motile by means of polar flagella. Vibrios are distinguished from pseudomonads by being fermentative as well as oxidative in their metabolism. Of the vibrios that are clinically significant to humans, Vibrio cholerae,the agent of cholera, is the most important.<br/><br/>Most vibrios have relatively simple growth factor requirements and will grow in synthetic media with glucose as a sole source of carbon and energy. However, since vibrios are typically marine organisms, most species require 2-3% NaCl or a sea water base for optimal growth. Vibrios vary in their nutritional versatility, but some species will grow on more than 150 different organic compounds as carbon and energy sources, occupying the same level of metabolic versatility as Pseudomonas. In liquid media vibrios are motile by polar flagella that are enclosed in a sheath continuous with the outer membrane of the cell wall. On solid media they may synthesize numerous lateral flagella which are not sheathed.<br/><br/>Vibrios are one of the most common organisms in surface waters of the world. They occur in both marine and freshwater habitats and in associations with aquatic animals. Some species are bioluminescent and live in mutualistic associations with fish and other marine life. Other species are pathogenic for fish, eels, and frogs, as well as other vertebrates and invertebrates. V. cholerae and V. parahaemolyticus are pathogens of humans. Both produce diarrhea, but in ways that are entirely different. V. parahaemolyticus is an invasive organism affecting primarily the colon; Cholerae is noninvasive, affecting the small intestine through secretion of an enterotoxin. Vibrio vulnificus is an emerging pathogen of humans. This organism causes wound infections, gastroenteritis, or a syndrome known as &#8220;primary septicemia.&#8221;<br/><br/>METHODOLOGY<br/><br/>EXPERIMENT: 1<br/><br/>Collection of Samples (Collins et al, 1973):<br/><br/>		Marine Samples were collected in different locations of Rameshwaram marine region (Palk bay) at the depth of 1 – 2 m at various locations. Sewage and soil samples were collected in and around G.R.D. College campus.<br/><br/>EXPERIMENT:2<br/><br/>2.1. Bacterial Enumeration (Mary et al, 1985):<br/><br/>	Number of culturable, aerobic, heterotrophic bacteria present in water and sediment samples was determined by plating on marine agar and nutrient agar. For marine isolates, the media were prepared by the 3.5% sodium chloride (NaCl). Then the plated were incubated at appropriate time and temperature.<br/><br/>EXPERIMENT: 3<br/><br/>3.1. Isolation of vibrio spp from water and sediment samples (Mary et al, 1985):<br/><br/>	Different selective media were used for the isolation of vibrio sp from marine source. For marine isolates, the media were prepared by the 3.5% sodium chloride (NaCl). Media used for the isolation of vibrio sp are 1. Thiosulfate Citrate Bile Sucrose Agar (with 3.5% NaCl) 2. Marine agar medium;<br/><br/>EXPERIMENT: 4<br/><br/>4.1 Identification<br/><br/>Microscopy: Gram-staining characteristics and cell morphologies were determined by standard methods (Gerhardt et al., 1981). Motility was observed in wet mount using microscope.<br/><br/>Cultural characteristics : Colony morphology of various isolates of vibrio sp were observed on Nutrient agar, Thiosulfate Citrate Bile Sucrose Agar (TCBS), Blood agar, Mac conkey agar, Mannitol salt agar and results were tabulated.<br/><br/>Physiological characterization: Preliminary physiological characterization such as catalase test, starch hydrolysis test, indole test, MRVP test, citrate test, oxidase test, string test, carbohydrate fermentation test (sugars used-sucrose, lactose, glucose, maltose, Mannitol) , cholera red reaction were carried out and results were tabulated.<br/><br/>EXPERIMENT: 5<br/><br/>Anti microbial susceptibility test Kirby-Bauer method<br/><br/>Procedure:<br/><br/>1.	Make a suspension at an appropriate turbidity of the bacterial culture to be tested.<br/><br/>2.	Place a sterile cotton swab in the bacterial suspension and remove the excess fluid by pressing and rotating the cotton against the inside of the tube above the fluid level. The swab is streaked in at least three directions over the surface of the Mueller-Hinton agar and TCBS agars obtain uniform growth. A final sweep is made around the rim of the agar. Be sure to streak for confluency.<br/><br/>3.	Allow the plates to dry for five minutes.<br/><br/>4.	Using sterile forceps, place disks containing the following antibiotics on the plate: penicillin G, ampicillin, cephalothin, erythromycin, tetracycline, methicillin, streptomycin or other appropriate antibiotic disks.<br/><br/>5.	Incubate the plates within 15 minutes after applying the disks. The plates should be incubated soon after placing the disks since the test is standardized under conditions where diffusion of the antibiotic and bacterial growth commence at approximately the same time.<br/><br/>6.	Following overnight incubation, measure the diameter of the zone of growth inhibition around each disk to the nearest whole mm. Examine the plates carefully for well-developed colonies within the zone of inhibition.<br/><br/>7.	Using a standard table of antibiotic susceptibilities, determine if the strain is resistant, intermediate, or susceptible to the antibiotics tested.<br/><br/>RESULT AND DISCUSSION<br/><br/>Totally 35 samples were collected in different locations of marine region, garden soil, sewage water and domestic water.Vibrio bacteria are gram-negative and largely halophilic. Vibrio is rod-shaped, and can be straight or curved. They are motile organisms, using a single polar flagellum to travel. Vibrios are one of the most common organisms in surface waters of the world. They occur in both marine and freshwater habitats and in associations with aquatic animals. Some species are bioluminescent and live in mutualistic associations with fish and other marine life. These samples were processed through the commonly used procedures such as selective media (listed below), Gram’s staining, wet mount observation for motility and bio chemical tests includes catalase test, starch hydrolysis test, indole test, MRVP test, citrate test, oxidase test, string test, carbohydrate fermentation test (sugars used-sucrose, lactose, glucose, maltose, Mannitol) , cholera red reaction were carried out and results were tabulated for identification of vibrio sp from the above samples, and that can be processed, the details of the description as shown<br/><br/>COLONY MORPHOLOGY OF vibrio sp.<br/><br/>MEDIA	   DETAILS<br/><br/>Nutrient agar	Moist, translucent, regular, disc shaped, 1-2mm in size, bluish tinge can be seen in transmitted light as distinctive colour<br/><br/>Mac Conkey agar	Colorless colonies after, prolonged incubation pink colour colonies were seen. (plate:2)<br/><br/>Blood agar	Colonies were surrounded by a zone of hemolysis<br/><br/>Thiosulphate citrate bile salt agar	Colonies are yellow in colour due to fermentation.<br/><br/>Mannitol salt agar	No prominent growth was observed.<br/><br/>The colony morphology of vibrio strains was varying during the isolation in the selective media. The colonies were very clear, moist, disc shaped, yellow and pink colonies were observed from various sources. The mother culture was sub cultured in the same media for culture maintenance. All the isolated vibrio strains were numbered for the easy identification and convenience. Gram staining reaction was recorded from heat fixed smears of vibrio culture. Motility and cell shape were determined by direct observation of wet mounts of fresh broth culture using microscopy. The chacteristics of Vibrio on TCBS medium shows that most of isolates were motile and capable of producing yellow and green pigmentation. Thiosulphate-citrate-bile salts-sucrose (TCBS) agar (Difco) is a selective medium commonly used to isolate members of the genus Vibrio from estuarine environments. The high concentration of thiosulphate and citrate and the strong alkalinity of the medium largely inhibit the growth of Enterbacteriaceas. Oxbile and cholate suppress primary enterococci .Any coliform bacteria, which may grow, cannot metabolize sucrose. Only a few sucrose Protease strains can grow to from yellow, vibriod like colonies. The mixed indicator thymol blue, bromothymol blue changes its color to yellow, when acid is formed even in this strongly alkaline medium<br/><br/>	Out of 35 different samples collected, only 17 samples were showing the presence of vibrio sp, most of the marine samples collected from various marine region shows positive results for vibrio sp, when compared to other samples such as sewage water and soil samples. And in case of domestic water sample (tap water and mineral water) shows absence of vibrio strain. Vibrios are inhabitants of aquatic environments. They occasionally infect humans, causing intestinal or extraintestinal diseases. The most prevalent diseases caused by vibrios are those that are well reported, including cholera and other forms of acute gastroenteritis. In addition, there may be many other vibrio-caused diseases that go unreported some of the virulence determinants of Vibrio spp. are well characterized.<br/><br/>ENUMERATION OF BACTERIAL POPULATION<br/><br/>		The total bacterial population were observed and enumerated on the marine agar plates and nutrient agar plates. The vibrio colonies were isolated and enumerated in a TCBS medium. Both populations were counted and shown<br/><br/>Showing the total bacterial population and vibrio count.<br/><br/>S.NO	LOCATION	Total bacterial Population	Vibrio Population<br/><br/>1	Marine region	108 × 105	65 × 102<br/><br/>2	Garden soil	142 × 106	21 × 102<br/><br/>3	Sewage water	161 × 106	42 × 102<br/><br/>4	Tap water	TFTC	0<br/><br/>5	Mineral water	TFTC	0<br/><br/>Physiological characteristics of vibrio sp<br/><br/>BIO CHEMICAL TEST	NO OF<br/><br/>POSITIVES	NO OF<br/><br/>NEGATIVES<br/><br/>OXIDASE TEST	16	1<br/><br/>NITRATE TEST	16	1<br/><br/>CATALASE TEST	8	9<br/><br/>INDOLE TEST	17	0<br/><br/>METHYL RED TEST	17	0<br/><br/>VOGES PROSKEUAR	5	12<br/><br/>STRING TEST	17	0<br/><br/>CHOLERA RED RXN	4	13<br/><br/>CITRATE TEST	7	10<br/><br/>STARCH HYDROLYSIS	0	17<br/><br/>HEAMOLYSIS	5	12<br/><br/>SUCROSE	15	2<br/><br/>MANNITOL, ACID	16	1<br/><br/>LACTOSE	0	17<br/><br/>GLUCOSE, ACID	17	0<br/><br/>GLUCOSE, GAS	1	16<br/><br/>MALTOSE	16	1<br/><br/>By observing the results of physiological tests, most of the tests were found to be positive for vibrio cholerae.The isolates which showed positive results for vibrio cholerae were mainly isolated from marine environment when compared to other samples such as sewage water and soil samples. Through this result we observed that Vibrios are inhabitants of aquatic environments. Marine animals can injure humans in several ways. Some animals cause injury by inducing infection. These infections result when oral bacteria are introduced in to the tissues of victims who are bitten. Bacteria present within the tissues of marine animals can cause infection when they are ingested. In addition, seawater itself contains bacteria, so that skin and soft tissue injuries exposed to seawater may become secondarily injected.<br/><br/>Kirby-Bauer Disk-Diffusion Method: Antibiotic Disk Susceptibilities<br/><br/>Most of the isolates from marine source were highly incidence of antibiotic resistance was evident against Amoxycillin, Ampicillin, Carbencillin and Cefuroxime followed by Rifampin and Streptomycin over soil and sewage samples. However, antibiotic resistance was lower against Chloramphenicol, Tetracycline, penicillin G, Nalidixicacid, Gentamycin Sulphafurazole, Trimethoprim, Neomycin and Amikacin. This may be due to the fact that terrestrial bacteria entering into seawater with antibiotic resistant plasmids may be responsible for the prevalence of the resistance in genes in the marine environment. However, there are few reports available on acquired antibiotic resistance against ampicillin (68%), cefuroxime (66.7%), amikacin (55%), kanamycin (58.8%) and trimethoprim (76.7%) in Sparus sarba in China. It can be presumed that anthropogenic factors (hospital effluents) might have influenced in acquiring resistance in Vibrio spp due to these antibiotics, as there are no reports available on the use of these drugs for aquaculture in India. However, the results of our present study serve as a baseline data for future research on the extent of antibiotic resistance, which may be revealed through isolation of plasmids, their transformation efficiency and conjugation experiments. Results of incidence of multiple antibiotic resistance in Vibrios may improve our knowledge on drug resistant strains and its effect on future therapy of shrimp as well as human diseases. Therefore, unscrupulous use of antibiotics against diseases should be avoided and restrictions for the use of antibiotics may be implemented by a nationwide antibiotic policy for India.<br/><br/>REFERENCES<br/><br/>1. Richard J., and Bennett N T.1993.Infections Caused by Halophilic<br/><br/>Marine Vibrio Bacteria. From the Department of Surgery, University of Florida, Gainesville, Florida Vol. 217, No. 5, 525-531<br/><br/>2. Colwell, R. R., and W. M. Spira. 1992. The ecology of V. cholerae, p. 107–127.<br/><br/>In D. Barua and W. B. Greenough III (ed.), Cholera. Plenum Medical Book<br/><br/>Co., New York, N.Y.<br/><br/>3. West, P. A., and J. V. Lee. 1982. Ecology of Vibrio spp. including V. cholerae<br/><br/>in natural waters of Kent, England. J. Appl. Bacteriol. 52:435–448.<br/><br/>4. Xu, H. S., N. C. Roberts, F. L. Singleton, R. W. Attwell, D. J. Grimes, and<br/><br/>R. R. Colwell. 1982. Survival and viability of nonculturable Escherichia coli<br/><br/>and Vibrio cholerae in the estuarine and marine environment. Microb. Ecol.<br/><br/>8:313–323.<br/><br/>5. Baumann, P., and R. H. W. Schubert. 1984. Family II. Vibrionaceae, p.<br/><br/>516–550. In N. R. Krieg and J. G. Holt (ed.), Bergey’s manual of systematic<br/><br/>Bacteriology, vol. 1. Williams &#038; Wilkins, Baltimore, Md.<br/><br/>6. Farmer, J. J., III, F. W. Hickman-Brenner, and M. T. Kelly. 1985. Vibrio, p.<br/><br/>282–301. In E. H. Lennette, A. Balows, W. J. Hausler, and H. J. Shadomy<br/><br/>(ed.), Manual of clinical microbiology, 4th ed. American Society for Microbiology,<br/><br/>Washington, D.C.<br/><br/>7. Kay, B. A., C. A. Bopp, and J. G. Wells. 1994. Isolation and identification of<br/><br/>Vibrio cholerae O1 from fecal specimens, p. 3–20. In I. K. Wachsmuth, P. A.<br/><br/>Blake, and O. Olsvik (ed.), Vibrio cholerae and cholera: molecular to global<br/><br/>perspectives. ASM Press, Washington, D.C.<br/><br/>8. West, P. A., and R. R. Colwell. 1983. Identification and classification of<br/><br/>Vibrionaceae–-an overview, p. 285–341. In R. R. Colwell and M. B. Hatem<br/><br/>(ed.), Vibrios in the environment. John Wiley &#038; Sons, New York, N.Y.<br/><br/>9. Chun, J., A. Huq, and R. R. Colwell. 1999. Analysis of 16S-23S rRNA<br/><br/>intergenic spacer regions of Vibrio cholerae and Vibrio mimicus. Appl. Environ.<br/><br/>Microbiol. 65:2202–2208<br/><br/>10. Nandi, B., R. K. Nandy, S. Mukhopadhyay, G. B. Nair, T. Shimada, and A. C.<br/><br/>Ghose. 2000. Rapid method for species-specific identification of Vibrio cholerae<br/><br/>using primers targeted to the gene of outer membrane protein W. J.<br/><br/>Clin. Microbiol. 38:4145–4151.<br/><br/>11.Gabriella caldini, Angela neri, Stefania cresti, Vieri boddi,<br/><br/>Gian maria rossolini, and Eudes lanciotti high prevalence of vibrio cholerae non-o1 carrying heat-stable enterotoxin-encoding genes among vibrio isolates from a temperate-climate river basin of central Italy. Applied and environmental microbiology July 1997, Vol. 63, No. 7 p. 2934–2939<br/><br/>12. Abbott, S.L., Cheung, W.W.K.W. and Janda, J.M. (1993) Evaluation of a new<br/><br/>selective agar, thiosulfate-chloride-iodide (TCI), for the growth of pathogenic<br/><br/>Vibrio species. Medical Microbiology Letters 2, 362–370.<br/><br/>13 .Morris, G.K. (1982) Media for Vibrio species. In Quality Assurance and Quality Control of Microbiological Culture Media ed. Corry, J.E.L. and Verlay, G.I.T. pp. 169–174. Germany: Darmstadt.<br/><br/>14. Oliver, J.D. (2003) Culture media for the isolation and enumeration of pathogenic<br/><br/>Vibrio species in foods and environmental samples. In Culture Media for Food<br/><br/>Microbiology, 2nd Edn eds Corry, J.E., Curtis, G.D.W. and Baird, R.M.<br/><br/>Amsterdam: Elsevier Science, in press.<br/><br/>15. Ferguson, G. E., C. W. Lingham, S. K. Love, and R. 0. Vernon. 1947. Springs of Florida, p. 196. Fla. Geol. Bull. no. 31. E. 0. Printing Co., DeLand, Fla.<br/><br/>16. Lee, J. S. 1973. What seafood processors should know about Vibrio parahemolyticus. J. Milk Food Technol. 36:405-408.<br/><br/>17.Gopal, S, SK Otta, I Karunasagar, M Nishibuchi, and I Karunasagar. &#8220;The occurrence of Vibrio species in tropical shrimp culture environments; implications for food safety.&#8221; International Journal of Food Microbiology. 2005 Jul 15;102(2):151-9.<br/><br/>18.Graf, J. &#8220;The Light-Organ Symbiosis of Vibrio fischeri and the Hawaiian Squid, Euprymna scolopes.&#8221; February 2005. Accessed 8 July 2005.<br/><br/>19.Ho, Hoi. &#8220;Vibrio infections.&#8221; eMedicine. 22 May 2005. Accessed 8 July 2005.<br/><br/>20.Oliver, JD. &#8220;Wound infections caused by Vibrio vulnificus and other marine bacteria.&#8221; Epidemiology and infection. 2005 Jun;133(3):383-91.<br/><br/>21.Sarkar, M, S Das, A Bandyopadhaya, K Ray, and K Chaudhuri. &#8220;Upregulation of human mitochondrial NADH dehydrogenase subunit 5 in intestinal epithelial cells is modulated by Vibrio cholerae pathogenesis.&#8221; FEBS letters. 2005 Jun 20;579(16):3449-60.<br/><br/>22.Senoh, Mistutoshi, Shin-Ichi Miyoshi, Keinosuke Okamoto, Belen Fouz, Carmen Amaro, and Sumio Shinoda. &#8220;The Cytotoxin-Hemolysin Genes of Human and Eel Pathogenic Vibrio vulificus Strains: Comparison of Nucelotide Sequences and Application to the Genetic Grouping. Microbiology and immunology. 2005;49(6):513-9.<br/><br/>23.Gerhard,P.,R.G.E.Murray,R.N.Costilow,E.W.Nester,W.A.Wood,N.R.Krieg,andG.B.phillips.1981.Manual of method for generalbacteriology.American SOCIETY FOR microbiology, Washington, D.C.<br/><br/>24. Mary. L. G and rita r. colwell, Enumeration, isolation and characterization of N2 fixing bacteria from sea water. Department of microbiology, University of Maryland. Vol 50 no .2. 1985<br/><br/>Other References<br/><br/>1.Dennis Kunkel Microscopy, Inc.<br/><br/>2.Fix, Douglas F. &#8220;Vibrio.&#8221; Accessed 8 July 2005.<br/><br/>3.Todar, Kenneth. Todar&#8217;s Online Textbook of Bacteriology. 2005. Accessed 8 July 2005.<br/><br/>4.Vibrio fischeri Genome Project. 19 September 2002. Accessed 8 July 2005.<br/><br/>5.http://microbewiki.kenyon.edu/index.php/Vibrio<br/><br/>6.Center for Disease Control. 1973. Vibrio parahaemolyticus gastroenteritis. Morbid. Mortal. Weekly Rep. 22:231-232.<br/><br/><br/><br/> </p>
]]></content:encoded>
			<wfw:commentRss>http://drug-test-information.com/characterization-and-antimicrobial-susceptibility-of-vibrio-spp-isolated-from-different-environments/feed/</wfw:commentRss>
		<slash:comments>2</slash:comments>
		</item>
	</channel>
</rss>

